Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CRAMP1Cramped chromatin regulator homolog 1. (1105 aa)    
Predicted Functional Partners:
NPAT
Nuclear protein, coactivator of histone transcription.
    
 
 0.934
ZNF512B
Zinc finger protein 512B.
    
 
 0.878
ENSCAPP00000001190
annotation not available
      
 0.852
ENSCAPP00000008331
annotation not available
    
   0.830
NR0B2
Nuclear receptor subfamily 0 group B member 2.
    
 
 0.821
CRYM
Crystallin mu.
      
 0.797
ENSCAPP00000004218
annotation not available
     
 0.736
FKBP8
FKBP prolyl isomerase 8.
      
 0.658
MTREX
Mtr4 exosome RNA helicase.
      
 0.635
SRF
Serum response factor.
    
 0.633
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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