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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRAMP1Cramped chromatin regulator homolog 1. (1105 aa)    
Predicted Functional Partners:
ENSCAPP00000000033
annotation not available
    
 0.637
RUNX2
RUNX family transcription factor 2.
    
 0.637
RUNX3
RUNX family transcription factor 3.
    
 0.637
SRF
Serum response factor.
    
 0.616
NR0B2
Nuclear receptor subfamily 0 group B member 2.
    
 
 0.602
NPAT
Nuclear protein, coactivator of histone transcription.
    
 
 0.590
ENSCAPP00000001190
annotation not available
      
 0.562
CRYM
Crystallin mu.
      
 0.556
MTREX
Mtr4 exosome RNA helicase.
      
 0.521
PAX2
Paired box 2.
    
 
 0.504
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.