STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JPH4Junctophilin 4. (389 aa)    
Predicted Functional Partners:
JPH3
Junctophilin 3.
  
 
0.837
JPH1
Junctophilin 1.
   
 
0.828
CACNA1S
Calcium voltage-gated channel subunit alpha1 S.
   
 
 0.744
ENSCAPP00000002664
annotation not available
   
 0.700
RYR1
Ryanodine receptor 1.
   
 0.569
TONSL
Tonsoku like, DNA repair protein.
   
  0.553
CACNA1C
Calcium voltage-gated channel subunit alpha1 C.
   
 
 0.536
CACNA1D
Calcium voltage-gated channel subunit alpha1 D.
   
 
 0.532
AP1M2
Adaptor related protein complex 1 subunit mu 2.
    
 
 0.518
RSPH9
Radial spoke head component 9.
    
 
 0.518
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.