Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000002655annotation not available (307 aa)    
Predicted Functional Partners:
PSMC5
Proteasome 26S subunit, ATPase 5.
    
 0.927
FBXW11
F-box and WD repeat domain containing 11.
    
 
 0.888
BTRC
Beta-transducin repeat containing E3 ubiquitin protein ligase.
    
 
 0.857
FZR1
Fizzy and cell division cycle 20 related 1.
    
  0.841
SNAI1
Snail family transcriptional repressor 1.
    
 
 0.825
USP28
Ubiquitin specific peptidase 28.
    
 0.763
STAM
Signal transducing adaptor molecule.
    
 0.741
STAM2
Signal transducing adaptor molecule 2.
    
 0.741
RUVBL1
RuvB like AAA ATPase 1.
    
  0.732
ENSCAPP00000009319
annotation not available
    
  0.732
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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