ENSCAPP00000002657 protein (Cavia aperea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSCAPP00000002657

annotation not available (261 aa)

Predicted Functional Partners:

FAM91A1

0.995

ENSCAPP00000012141

0.976

ENSCAPP00000006743

0.969

ENSCAPP00000015929

0.959

SNF8

0.956

VPS36

0.955

VPS28

0.954

UEVLD

0.953

ENSCAPP00000001732

0.949

CIAO1

0.949

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CIAO1	ENSCAPP00000001732	ENSCAPP00000015078	ENSCAPP00000001732	Cytosolic iron-sulfur assembly component 1.	annotation not available	0.949
CIAO1	ENSCAPP00000002657	ENSCAPP00000015078	ENSCAPP00000002657	Cytosolic iron-sulfur assembly component 1.	annotation not available	0.949
ENSCAPP00000001732	CIAO1	ENSCAPP00000001732	ENSCAPP00000015078	annotation not available	Cytosolic iron-sulfur assembly component 1.	0.949
ENSCAPP00000001732	ENSCAPP00000002657	ENSCAPP00000001732	ENSCAPP00000002657	annotation not available	annotation not available	0.949
ENSCAPP00000002657	CIAO1	ENSCAPP00000002657	ENSCAPP00000015078	annotation not available	Cytosolic iron-sulfur assembly component 1.	0.949
ENSCAPP00000002657	ENSCAPP00000001732	ENSCAPP00000002657	ENSCAPP00000001732	annotation not available	annotation not available	0.949
ENSCAPP00000002657	ENSCAPP00000006743	ENSCAPP00000002657	ENSCAPP00000006743	annotation not available	annotation not available	0.969
ENSCAPP00000002657	ENSCAPP00000012141	ENSCAPP00000002657	ENSCAPP00000012141	annotation not available	annotation not available	0.976
ENSCAPP00000002657	ENSCAPP00000015929	ENSCAPP00000002657	ENSCAPP00000015929	annotation not available	annotation not available	0.959
ENSCAPP00000002657	FAM91A1	ENSCAPP00000002657	ENSCAPP00000000070	annotation not available	Family with sequence similarity 91 member A1.	0.995
ENSCAPP00000002657	SNF8	ENSCAPP00000002657	ENSCAPP00000005583	annotation not available	SNF8 subunit of ESCRT-II.	0.956
ENSCAPP00000002657	UEVLD	ENSCAPP00000002657	ENSCAPP00000010660	annotation not available	UEV and lactate/malate dehyrogenase domains.	0.953
ENSCAPP00000002657	VPS28	ENSCAPP00000002657	ENSCAPP00000002986	annotation not available	VPS28 subunit of ESCRT-I.	0.954
ENSCAPP00000002657	VPS36	ENSCAPP00000002657	ENSCAPP00000005313	annotation not available	Vacuolar protein sorting 36 homolog.	0.955
ENSCAPP00000006743	ENSCAPP00000002657	ENSCAPP00000006743	ENSCAPP00000002657	annotation not available	annotation not available	0.969
ENSCAPP00000006743	ENSCAPP00000015929	ENSCAPP00000006743	ENSCAPP00000015929	annotation not available	annotation not available	0.985
ENSCAPP00000006743	SNF8	ENSCAPP00000006743	ENSCAPP00000005583	annotation not available	SNF8 subunit of ESCRT-II.	0.986
ENSCAPP00000006743	UEVLD	ENSCAPP00000006743	ENSCAPP00000010660	annotation not available	UEV and lactate/malate dehyrogenase domains.	0.954
ENSCAPP00000006743	VPS28	ENSCAPP00000006743	ENSCAPP00000002986	annotation not available	VPS28 subunit of ESCRT-I.	0.977
ENSCAPP00000006743	VPS36	ENSCAPP00000006743	ENSCAPP00000005313	annotation not available	Vacuolar protein sorting 36 homolog.	0.975