STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBC1D8TBC1 domain family member 8. (1087 aa)    
Predicted Functional Partners:
TBC1D9
TBC1 domain family member 9.
    
   0.815
CDC16
Cell division cycle 16.
      
 0.746
TBC1D21
TBC1 domain family member 21.
      
 0.734
TBC1D13
TBC1 domain family member 13.
      
 0.721
ANKFY1
Ankyrin repeat and FYVE domain containing 1.
     
 0.679
TBC1D19
TBC1 domain family member 19.
      
 0.677
TBC1D20
TBC1 domain family member 20.
      
 0.675
GAK
Cyclin G associated kinase.
   
 
  0.674
HIP1R
Huntingtin interacting protein 1 related.
   
 
  0.649
TBC1D17
TBC1 domain family member 17.
      
 0.649
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.