Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MYO15AMyosin XVA. (3131 aa)    
Predicted Functional Partners:
WHRN
Whirlin.
    
 0.994
ACTG2
Actin gamma 2, smooth muscle.
    
 0.917
ACTA1
Actin alpha 1, skeletal muscle.
    
 0.917
ACTC1
Actin alpha cardiac muscle 1.
    
 0.917
ACTA2
Actin alpha 2, smooth muscle.
    
 0.917
ENSCAPP00000007890
annotation not available
     
  0.911
ENSCAPP00000010888
annotation not available
    
 0.888
EPS8
Epidermal growth factor receptor pathway substrate 8.
    
 0.886
EPS8L2
EPS8 like 2.
    
 0.875
ESPNL
Espin like.
    
 0.850
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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