STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NIPAL3NIPA like domain containing 3. (408 aa)    
Predicted Functional Partners:
FAM131C
Family with sequence similarity 131 member C.
      
 0.753
MAN1C1
Mannosidase alpha class 1C member 1.
      
 0.677
ZBTB40
Zinc finger and BTB domain containing 40.
      
 0.601
ABITRAM
Actin binding transcription modulator.
      
 0.575
NME6
NME/NM23 nucleoside diphosphate kinase 6.
      
 0.569
MMGT1
Membrane magnesium transporter 1.
      
 0.569
PDZD3
PDZ domain containing 3.
      
 0.567
SERAC1
Serine active site containing 1.
      
 0.567
TXNDC16
Thioredoxin domain containing 16.
      
 0.565
SPRYD7
SPRY domain containing 7.
      
 0.564
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.