Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TCF3Transcription factor 3. (682 aa)    
Predicted Functional Partners:
TAL1
TAL bHLH transcription factor 1, erythroid differentiation factor.
    
 0.991
CTNNB1
Catenin beta 1.
    
 0.986
MYOG
Myogenin.
    
 0.978
CREBBP
CREB binding protein.
    
 0.970
EP300
E1A binding protein p300.
    
 0.963
ASCL3
Achaete-scute family bHLH transcription factor 3.
    
 0.958
ENSCAPP00000016580
annotation not available
    
 0.952
NEUROD4
Neuronal differentiation 4.
    
 
 0.944
MYF6
Myogenic factor 6.
    
 0.943
MYF5
Myogenic factor 5.
    
 0.921
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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