Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABCE1ATP binding cassette subfamily E member 1. (534 aa)    
Predicted Functional Partners:
ENSCAPP00000016629
annotation not available
   
 0.994
ETF1
Eukaryotic translation termination factor 1.
   
 
 0.993
ENSCAPP00000015878
annotation not available
   
 0.989
RPS18
Ribosomal protein S18.
   
 0.987
RPS7
Ribosomal protein S7.
   
 0.986
RPS9
Ribosomal protein S9.
   
 0.986
ENSCAPP00000001392
annotation not available
    
 0.983
RACK1
Receptor for activated C kinase 1.
   
 
 0.980
ENSCAPP00000003698
annotation not available
   
 0.979
ENSCAPP00000007428
annotation not available
   
 0.979
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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