Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CNTN6Contactin 6. (736 aa)    
Predicted Functional Partners:
PTPRG
Protein tyrosine phosphatase receptor type G.
    
 
 0.952
ENSCAPP00000011724
annotation not available
   
 0.746
CNTNAP1
Contactin associated protein 1.
   
 0.743
ENSCAPP00000007456
annotation not available
   
 0.743
CNTNAP5
Contactin associated protein like 5.
   
 0.743
ENSCAPP00000001356
annotation not available
   
 0.735
ENSCAPP00000013173
annotation not available
   
 0.735
ENSCAPP00000016016
annotation not available
   
 0.735
NFASC
Neurofascin.
   
 0.729
L1CAM
L1 cell adhesion molecule.
   
 0.717
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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