Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADAMTSL3ADAMTS like 3. (1540 aa)    
Predicted Functional Partners:
MIPOL1
Mirror-image polydactyly 1.
   
    0.974
ENSCAPP00000013870
annotation not available
      
 0.692
POFUT2
Protein O-fucosyltransferase 2.
     
 0.605
B3GLCT
Beta 3-glucosyltransferase.
    
 0.593
DENND2A
DENN domain containing 2A.
      
 0.571
ENSCAPP00000015595
annotation not available
      
 0.569
ADAMTS9
ADAM metallopeptidase with thrombospondin type 1 motif 9.
     
 0.536
CCDC181
Coiled-coil domain containing 181.
      
 0.530
FRK
Fyn related Src family tyrosine kinase.
   
    0.513
ADAMTS7
ADAM metallopeptidase with thrombospondin type 1 motif 7.
     
 0.508
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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