PCGF5 protein (Cavia aperea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

PCGF5

Polycomb group ring finger 5. (244 aa)

Predicted Functional Partners:

RING1

0.992

RYBP

0.986

ENSCAPP00000011556

0.975

KDM2B

0.974

KDM2A

0.974

ENSCAPP00000013591

0.974

FBXL19

0.974

ENSCAPP00000009463

0.972

ENSCAPP00000018370

0.972

PCGF3

0.969

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCAPP00000009463	ENSCAPP00000011556	ENSCAPP00000009463	ENSCAPP00000011556	annotation not available	annotation not available	0.928
ENSCAPP00000009463	ENSCAPP00000013591	ENSCAPP00000009463	ENSCAPP00000013591	annotation not available	annotation not available	0.991
ENSCAPP00000009463	FBXL19	ENSCAPP00000009463	ENSCAPP00000018375	annotation not available	F-box and leucine rich repeat protein 19.	0.990
ENSCAPP00000009463	KDM2A	ENSCAPP00000009463	ENSCAPP00000005331	annotation not available	Lysine demethylase 2A.	0.990
ENSCAPP00000009463	KDM2B	ENSCAPP00000009463	ENSCAPP00000001666	annotation not available	Lysine demethylase 2B.	0.991
ENSCAPP00000009463	PCGF3	ENSCAPP00000009463	ENSCAPP00000010538	annotation not available	Polycomb group ring finger 3.	0.941
ENSCAPP00000009463	PCGF5	ENSCAPP00000009463	ENSCAPP00000002705	annotation not available	Polycomb group ring finger 5.	0.972
ENSCAPP00000009463	RING1	ENSCAPP00000009463	ENSCAPP00000010939	annotation not available	Ring finger protein 1.	0.972
ENSCAPP00000009463	RYBP	ENSCAPP00000009463	ENSCAPP00000012642	annotation not available	RING1 and YY1 binding protein.	0.979
ENSCAPP00000011556	ENSCAPP00000009463	ENSCAPP00000011556	ENSCAPP00000009463	annotation not available	annotation not available	0.928
ENSCAPP00000011556	ENSCAPP00000013591	ENSCAPP00000011556	ENSCAPP00000013591	annotation not available	annotation not available	0.993
ENSCAPP00000011556	ENSCAPP00000018370	ENSCAPP00000011556	ENSCAPP00000018370	annotation not available	annotation not available	0.928
ENSCAPP00000011556	FBXL19	ENSCAPP00000011556	ENSCAPP00000018375	annotation not available	F-box and leucine rich repeat protein 19.	0.992
ENSCAPP00000011556	KDM2A	ENSCAPP00000011556	ENSCAPP00000005331	annotation not available	Lysine demethylase 2A.	0.992
ENSCAPP00000011556	KDM2B	ENSCAPP00000011556	ENSCAPP00000001666	annotation not available	Lysine demethylase 2B.	0.993
ENSCAPP00000011556	PCGF3	ENSCAPP00000011556	ENSCAPP00000010538	annotation not available	Polycomb group ring finger 3.	0.959
ENSCAPP00000011556	PCGF5	ENSCAPP00000011556	ENSCAPP00000002705	annotation not available	Polycomb group ring finger 5.	0.975
ENSCAPP00000011556	RING1	ENSCAPP00000011556	ENSCAPP00000010939	annotation not available	Ring finger protein 1.	0.975
ENSCAPP00000011556	RYBP	ENSCAPP00000011556	ENSCAPP00000012642	annotation not available	RING1 and YY1 binding protein.	0.860
ENSCAPP00000013591	ENSCAPP00000009463	ENSCAPP00000013591	ENSCAPP00000009463	annotation not available	annotation not available	0.991