Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZBTB2Zinc finger and BTB domain containing 2. (514 aa)    
Predicted Functional Partners:
ZNF639
Zinc finger protein 639.
    
 
 0.959
ZNF219
Zinc finger protein 219.
    
   0.957
HDAC1
Histone deacetylase 1.
    
 0.952
ENSCAPP00000015456
annotation not available
    
 0.945
HDAC2
Histone deacetylase 2.
    
 0.852
CDK2AP1
Cyclin dependent kinase 2 associated protein 1.
    
   0.842
TP53
Tumor protein p53.
    
 0.840
ZNF536
Zinc finger protein 536.
    
   0.827
P4HB
Prolyl 4-hydroxylase subunit beta.
    
   0.820
MBD3
methyl-CpG binding domain protein 3.
    
 0.789
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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