STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GPANK1G-patch domain and ankyrin repeats 1. (371 aa)    
Predicted Functional Partners:
APOM
Apolipoprotein M.
      
 0.878
PRRC2A
Proline rich coiled-coil 2A.
      
 0.688
ENSCAPP00000003474
annotation not available
      
 0.686
VWA7
Von Willebrand factor A domain containing 7.
      
 0.686
PRKRIP1
PRKR interacting protein 1.
   
  
 0.608
SFXN5
Sideroflexin 5.
      
 0.570
CXorf56
Chromosome X open reading frame 56.
      
 0.568
FAM110A
Family with sequence similarity 110 member A.
      
 0.537
LRRC28
Leucine rich repeat containing 28.
      
 0.530
ABT1
Activator of basal transcription 1.
   
  
 0.479
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.