Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NAB1NGFI-A binding protein 1. (486 aa)    
Predicted Functional Partners:
EGR1
Early growth response 1.
    
 0.960
ZNF362
Zinc finger protein 362.
    
 0.913
ENSCAPP00000011563
annotation not available
    
 0.913
ENSCAPP00000005288
annotation not available
   
  0.839
EGR2
Early growth response 2.
    
 0.778
AKTIP
AKT interacting protein.
    
   0.709
PRDM15
PR/SET domain 15.
    
 0.617
NFYB
Nuclear transcription factor Y subunit beta.
      
 0.611
VASH1
Vasohibin 1.
      
 0.571
SRF
Serum response factor.
     
 0.555
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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