Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PIGRPolymeric immunoglobulin receptor. (726 aa)    
Predicted Functional Partners:
JCHAIN
Joining chain of multimeric IgA and IgM.
  
 0.999
TSPAN8
Tetraspanin 8.
   
  0.980
CD79A
CD79a molecule.
   
 
 0.940
CD79B
CD79b molecule.
   
 
 0.936
SYK
Spleen associated tyrosine kinase.
    
 0.919
ENSCAPP00000009203
annotation not available
    
  0.911
TGM4
Transglutaminase 4.
    
 
 0.841
PIGA
Phosphatidylinositol glycan anchor biosynthesis class A.
     
 0.812
VPREB3
V-set pre-B cell surrogate light chain 3.
   
 0.798
VPREB1
V-set pre-B cell surrogate light chain 1.
    
  0.772
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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