STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBFBCore-binding factor subunit beta. (100 aa)    
Predicted Functional Partners:
CUL5
Cullin 5.
    
 
 0.968
RUNX2
RUNX family transcription factor 2.
    
 0.966
ENSCAPP00000000033
annotation not available
    
 0.958
RUNX3
RUNX family transcription factor 3.
    
 0.958
ENSCAPP00000016562
annotation not available
    
 
 0.943
ELOC
Elongin C.
    
 
 0.902
ENSCAPP00000010874
annotation not available
    
 
 0.902
COX4I1
Cytochrome c oxidase subunit 4I1.
    
 
 0.802
COX4I2
Cytochrome c oxidase subunit 4I2.
    
 
 0.802
TCF3
Transcription factor 3.
     
 0.769
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.