STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000002730annotation not available (113 aa)    
Predicted Functional Partners:
SMAD4
SMAD family member 4.
   
 0.999
ENSCAPP00000007274
annotation not available
   
 0.999
TGFBR1
Transforming growth factor beta receptor 1.
    
 0.999
ENSCAPP00000008686
annotation not available
    
 0.999
SMAD2
SMAD family member 2.
   
 0.999
ZFYVE9
Zinc finger FYVE-type containing 9.
    
 0.998
SMURF2
SMAD specific E3 ubiquitin protein ligase 2.
    
 0.995
FOXH1
Forkhead box H1.
    
 0.995
ENSCAPP00000010800
annotation not available
    
 0.992
CTNNB1
Catenin beta 1.
  
 
 0.991
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.