Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
USP47Ubiquitin specific peptidase 47. (1317 aa)    
Predicted Functional Partners:
BTRC
Beta-transducin repeat containing E3 ubiquitin protein ligase.
    
 
 0.962
FBXW11
F-box and WD repeat domain containing 11.
    
 
 0.962
POLB
DNA polymerase beta.
    
 0.945
AP4M1
Adaptor related protein complex 4 subunit mu 1.
    
   0.840
TRAF6
TNF receptor associated factor 6.
    
 
 0.828
ZRANB1
Zinc finger RANBP2-type containing 1.
    
 
 0.802
AGO2
Argonaute RISC catalytic component 2.
   
   0.787
KATNA1
Katanin catalytic subunit A1.
    
 
 0.723
CEBPE
CCAAT enhancer binding protein epsilon.
    
   0.722
EFL1
Elongation factor like GTPase 1.
   
 
  0.690
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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