STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF518AZinc finger protein 518A. (1181 aa)    
Predicted Functional Partners:
U2SURP
U2 snRNP associated SURP domain containing.
   
 
 0.631
MYSM1
Myb like, SWIRM and MPN domains 1.
   
  0.595
PNISR
PNN interacting serine and arginine rich protein.
   
 0.518
GART
annotation not available
     
  0.505
ZSWIM1
Zinc finger SWIM-type containing 1.
  
 
  0.495
BARD1
BRCA1 associated RING domain 1.
    
 0.484
THOC1
THO complex 1.
      
 0.454
ZCCHC2
Zinc finger CCHC-type containing 2.
    
 0.428
LTB4R
Leukotriene B4 receptor.
  
 
   0.426
GTF2A1
General transcription factor IIA subunit 1.
   
 0.423
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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