Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CST8Cystatin 8. (144 aa)    
Predicted Functional Partners:
ENSCAPP00000003804
annotation not available
   
  
 0.735
GZF1
GDNF inducible zinc finger protein 1.
    
 
 0.708
ACSS1
acyl-CoA synthetase short chain family member 1.
      
 0.671
NXT1
Nuclear transport factor 2 like export factor 1.
      
 0.667
ENSCAPP00000018140
annotation not available
   
  
 0.648
ENSCAPP00000000322
annotation not available
      
 0.638
GRN
Granulin precursor.
   
 0.622
ENSCAPP00000001745
annotation not available
      
 0.604
ENSCAPP00000012309
annotation not available
      
 0.572
LCN8
Lipocalin 8.
   
  
 0.568
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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