STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERLEC1Endoplasmic reticulum lectin 1. (358 aa)    
Predicted Functional Partners:
DERL1
Derlin 1.
    
 0.975
VCP
Valosin containing protein.
    
 0.966
SEL1L
SEL1L adaptor subunit of ERAD E3 ubiquitin ligase.
   
 0.956
DERL2
Derlin 2.
    
 0.945
ENSCAPP00000017700
annotation not available
    
 0.940
AMFR
Autocrine motility factor receptor.
   
 0.933
ENSCAPP00000003228
annotation not available
   
 0.933
ENSCAPP00000016519
annotation not available
   
 0.921
SEL1L3
SEL1L family member 3.
   
 0.912
HSPA5
Heat shock protein family A (Hsp70) member 5.
   
 0.891
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.