STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHC1Polyhomeotic homolog 1. (914 aa)    
Predicted Functional Partners:
KDM2B
Lysine demethylase 2B.
    
 0.870
KDM2A
Lysine demethylase 2A.
    
 0.870
ENSCAPP00000013591
annotation not available
    
 0.870
FBXL19
F-box and leucine rich repeat protein 19.
    
 0.870
BARD1
BRCA1 associated RING domain 1.
    
  0.867
KDM6B
Lysine demethylase 6B.
   
  0.818
SCMH1
Scm polycomb group protein homolog 1.
    
 0.790
CFP
Complement factor properdin.
    
 0.771
C6
Complement C6.
   
 0.759
ENSCAPP00000010667
annotation not available
   
 0.758
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.