STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MSANTD4Myb/SANT DNA binding domain containing 4 with coiled-coils. (345 aa)    
Predicted Functional Partners:
ZBED4
Zinc finger BED-type containing 4.
    
 
 0.898
AASDHPPT
Aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase.
    
 
 0.664
ENSCAPP00000011856
annotation not available
    
 
 0.621
TOX
Thymocyte selection associated high mobility group box.
    
 0.590
VEPH1
Ventricular zone expressed PH domain containing 1.
      
 0.583
MARS1
methionyl-tRNA synthetase 1.
    
 
 0.565
ENSCAPP00000016086
annotation not available
      
 0.562
MYSM1
Myb like, SWIRM and MPN domains 1.
    
  0.556
ENSCAPP00000017853
annotation not available
      
 0.513
RHOQ
Ras homolog family member Q.
    
 0.510
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.