STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000002777annotation not available (65 aa)    
Predicted Functional Partners:
POMP
Proteasome maturation protein.
    
 
 0.687
PSMA1
Proteasome 20S subunit alpha 1.
    
   0.669
PSMG1
Proteasome assembly chaperone 1.
    
 
 0.549
PSMB9
Proteasome 20S subunit beta 9.
    
 
 0.543
PSMA5
Proteasome 20S subunit alpha 5.
    
   0.530
PSMB7
Proteasome 20S subunit beta 7.
    
 
 0.458
ENSCAPP00000010846
annotation not available
    
 
 0.436
MRPS18A
Mitochondrial ribosomal protein S18A.
    
 
 0.436
PSMB6
Proteasome 20S subunit beta 6.
    
 
 0.431
ANAPC15
Anaphase promoting complex subunit 15.
      
 0.418
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.