Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GFM1G elongation factor mitochondrial 1. (731 aa)    
Predicted Functional Partners:
MRPS7
Mitochondrial ribosomal protein S7.
 
 0.978
MRPS16
Mitochondrial ribosomal protein S16.
  
 
 0.972
EEF1G
Eukaryotic translation elongation factor 1 gamma.
   
 
 0.965
ENSCAPP00000005375
annotation not available
  
 
 0.950
MRPS12
Mitochondrial ribosomal protein S12.
 
 0.947
MRPS6
Mitochondrial ribosomal protein S6.
  
 
 0.945
MRPS11
Mitochondrial ribosomal protein S11.
 
 0.942
MRRF
Mitochondrial ribosome recycling factor.
  
 
 0.941
MRPS14
Mitochondrial ribosomal protein S14.
  
 0.938
MRPL13
Mitochondrial ribosomal protein L13.
  
 0.937
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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