ENSCAPP00000002788 protein (Cavia aperea) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

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[Homology]

Score

ENSCAPP00000002788

annotation not available (476 aa)

Predicted Functional Partners:

IDUA

0.989

ENSCAPP00000001062

0.959

HPSE

0.911

GUSB

0.898

ENSCAPP00000010970

0.768

ENSCAPP00000004104

0.738

MED21

0.737

MED6

0.736

ENSCAPP00000004818

0.733

ENSCAPP00000001260

0.732

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCAPP00000001062	ENSCAPP00000002788	ENSCAPP00000001062	ENSCAPP00000002788	annotation not available	annotation not available	0.959
ENSCAPP00000001062	GUSB	ENSCAPP00000001062	ENSCAPP00000017902	annotation not available	Glucuronidase beta.	0.538
ENSCAPP00000001062	IDUA	ENSCAPP00000001062	ENSCAPP00000009538	annotation not available	alpha-L-iduronidase.	0.486
ENSCAPP00000001260	ENSCAPP00000002788	ENSCAPP00000001260	ENSCAPP00000002788	annotation not available	annotation not available	0.732
ENSCAPP00000001260	ENSCAPP00000004104	ENSCAPP00000001260	ENSCAPP00000004104	annotation not available	annotation not available	0.999
ENSCAPP00000001260	ENSCAPP00000004818	ENSCAPP00000001260	ENSCAPP00000004818	annotation not available	annotation not available	0.999
ENSCAPP00000001260	ENSCAPP00000010970	ENSCAPP00000001260	ENSCAPP00000010970	annotation not available	annotation not available	0.998
ENSCAPP00000001260	MED21	ENSCAPP00000001260	ENSCAPP00000015937	annotation not available	Mediator complex subunit 21.	0.999
ENSCAPP00000001260	MED6	ENSCAPP00000001260	ENSCAPP00000005706	annotation not available	Mediator complex subunit 6.	0.998
ENSCAPP00000002788	ENSCAPP00000001062	ENSCAPP00000002788	ENSCAPP00000001062	annotation not available	annotation not available	0.959
ENSCAPP00000002788	ENSCAPP00000001260	ENSCAPP00000002788	ENSCAPP00000001260	annotation not available	annotation not available	0.732
ENSCAPP00000002788	ENSCAPP00000004104	ENSCAPP00000002788	ENSCAPP00000004104	annotation not available	annotation not available	0.738
ENSCAPP00000002788	ENSCAPP00000004818	ENSCAPP00000002788	ENSCAPP00000004818	annotation not available	annotation not available	0.733
ENSCAPP00000002788	ENSCAPP00000010970	ENSCAPP00000002788	ENSCAPP00000010970	annotation not available	annotation not available	0.768
ENSCAPP00000002788	GUSB	ENSCAPP00000002788	ENSCAPP00000017902	annotation not available	Glucuronidase beta.	0.898
ENSCAPP00000002788	HPSE	ENSCAPP00000002788	ENSCAPP00000011884	annotation not available	Heparanase.	0.911
ENSCAPP00000002788	IDUA	ENSCAPP00000002788	ENSCAPP00000009538	annotation not available	alpha-L-iduronidase.	0.989
ENSCAPP00000002788	MED21	ENSCAPP00000002788	ENSCAPP00000015937	annotation not available	Mediator complex subunit 21.	0.737
ENSCAPP00000002788	MED6	ENSCAPP00000002788	ENSCAPP00000005706	annotation not available	Mediator complex subunit 6.	0.736
ENSCAPP00000004104	ENSCAPP00000001260	ENSCAPP00000004104	ENSCAPP00000001260	annotation not available	annotation not available	0.999