Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HOXD10Homeobox D10. (257 aa)    
Predicted Functional Partners:
COL2A1
Collagen type II alpha 1 chain.
      
 0.891
MKX
Mohawk homeobox.
    
 
 0.682
ENSCAPP00000008781
annotation not available
    
 
 0.608
PBX2
PBX homeobox 2.
    
 
 0.608
ENSCAPP00000013033
annotation not available
    
 
 0.608
TBX20
T-box transcription factor 20.
    
 
 0.597
ENSCAPP00000004698
annotation not available
    
 
 0.582
RASAL3
RAS protein activator like 3.
      
 0.572
ENSCAPP00000001825
annotation not available
      
 0.556
ENSCAPP00000010718
annotation not available
   
 
 0.497
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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