Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CLSTN2Calsyntenin 2. (845 aa)    
Predicted Functional Partners:
APP
Amyloid beta precursor protein.
   
 
 0.842
PRNP
Prion protein.
   
 
 0.715
ENSCAPP00000002335
annotation not available
      
 0.707
CTNNB1
Catenin beta 1.
     
  0.699
APLP2
Amyloid beta precursor like protein 2.
   
 
 0.666
NUP37
Nucleoporin 37.
    
   0.666
SHFL
Shiftless antiviral inhibitor of ribosomal frameshifting.
      
 0.614
ALPK3
Alpha kinase 3.
      
 0.614
KLC1
Kinesin light chain 1.
    
 
 0.613
KLC2
Kinesin light chain 2.
    
 
 0.613
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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