STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000002799annotation not available (107 aa)    
Predicted Functional Partners:
ORMDL3
ORMDL sphingolipid biosynthesis regulator 3.
    
 0.990
SPTLC1
Serine palmitoyltransferase long chain base subunit 1.
   
 0.988
SPTLC3
Serine palmitoyltransferase long chain base subunit 3.
     
 0.952
ENSCAPP00000011545
annotation not available
    
 0.943
ORMDL1
ORMDL sphingolipid biosynthesis regulator 1.
    
 0.940
KDSR
3-ketodihydrosphingosine reductase.
     
 0.938
GOLGA7B
Golgin A7 family member B.
     
  0.913
SHMT1
Serine hydroxymethyltransferase 1.
  
 
 0.873
SHMT2
Serine hydroxymethyltransferase 2.
  
 
 0.873
ENSCAPP00000018242
annotation not available
    
 0.872
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.