Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TUT4Terminal uridylyl transferase 4. (1421 aa)    
Predicted Functional Partners:
ENSCAPP00000009842
annotation not available
   
 0.969
SPEG
Striated muscle enriched protein kinase.
    
   0.825
ENSCAPP00000014571
annotation not available
   
 
 0.812
DIS3L2
DIS3 like 3'-5' exoribonuclease 2.
    
 
 0.751
PAPOLA
poly(A) polymerase alpha.
   
 
 0.732
LIN28B
Lin-28 homolog B.
    
 0.701
ENSCAPP00000001144
annotation not available
     
 0.645
POLR2G
RNA polymerase II subunit G.
    
  0.604
POLR2C
RNA polymerase II subunit C.
    
  0.595
POLR2E
RNA polymerase II subunit E.
    
  0.595
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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