STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TUT4Terminal uridylyl transferase 4. (1421 aa)    
Predicted Functional Partners:
DIS3L2
DIS3 like 3'-5' exoribonuclease 2.
    
 
 0.667
LIN28B
Lin-28 homolog B.
   
 0.660
BICC1
BicC family RNA binding protein 1.
   
 0.620
ENSCAPP00000002198
annotation not available
   
 0.594
CPSF3
Cleavage and polyadenylation specific factor 3.
    
 0.572
CPSF1
Cleavage and polyadenylation specific factor 1.
    
 0.568
ENSCAPP00000014571
annotation not available
   
  
 0.554
EIF4A3
Eukaryotic translation initiation factor 4A3.
    
 0.517
PABPC4L
poly(A) binding protein cytoplasmic 4 like.
   
 0.508
PABPC3
poly(A) binding protein cytoplasmic 3.
   
 0.508
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.