Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC18A2Solute carrier family 18 member A2. (497 aa)    
Predicted Functional Partners:
SLC17A7
Solute carrier family 17 member 7.
     
 0.947
ENSCAPP00000005959
annotation not available
   
 
 0.940
SLC17A8
Solute carrier family 17 member 8.
     
 0.935
ENSCAPP00000014365
annotation not available
     
  0.911
TNNI3
Troponin I3, cardiac type.
      
 0.884
SLC6A3
Solute carrier family 6 member 3.
   
 
 0.790
SLC29A4
Solute carrier family 29 member 4.
    
 
 0.773
TH
Tyrosine hydroxylase.
    
 
 0.758
DDC
Dopa decarboxylase.
   
 
 0.754
SLC6A4
Solute carrier family 6 member 4.
   
 
 0.732
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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