STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CIDECCell death inducing DFFA like effector c. (221 aa)    
Predicted Functional Partners:
PLIN1
Perilipin 1.
   
  
 0.847
RDH8
Retinol dehydrogenase 8.
   
    0.673
PLPP2
Phospholipid phosphatase 2.
      
 0.560
FFAR2
Free fatty acid receptor 2.
      
 0.553
CAPNS1
Calpain small subunit 1.
      
 0.553
ENSCAPP00000013711
annotation not available
      
 0.552
DFFA
DNA fragmentation factor subunit alpha.
      
 0.550
DHRS7C
Dehydrogenase/reductase 7C.
   
    0.522
ADIPOQ
Adiponectin, C1Q and collagen domain containing.
   
  
 0.475
PPARG
Peroxisome proliferator activated receptor gamma.
   
  
 0.457
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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