ENSCAPP00000002819 protein (Cavia aperea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSCAPP00000002819

annotation not available (303 aa)

Predicted Functional Partners:

ENSCAPP00000012139

0.829

MRPL58

0.808

MRPS7

0.807

MRPS25

0.796

AURKAIP1

0.792

MRPL40

0.791

MRPS16

0.791

MRPL55

0.787

MRPL13

0.787

ENSCAPP00000012773

0.787

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AURKAIP1	ENSCAPP00000002819	ENSCAPP00000013321	ENSCAPP00000002819	Aurora kinase A interacting protein 1.	annotation not available	0.792
AURKAIP1	ENSCAPP00000012139	ENSCAPP00000013321	ENSCAPP00000012139	Aurora kinase A interacting protein 1.	annotation not available	0.947
AURKAIP1	ENSCAPP00000012773	ENSCAPP00000013321	ENSCAPP00000012773	Aurora kinase A interacting protein 1.	annotation not available	0.863
AURKAIP1	MRPL13	ENSCAPP00000013321	ENSCAPP00000004334	Aurora kinase A interacting protein 1.	Mitochondrial ribosomal protein L13.	0.863
AURKAIP1	MRPL40	ENSCAPP00000013321	ENSCAPP00000011896	Aurora kinase A interacting protein 1.	Mitochondrial ribosomal protein L40.	0.974
AURKAIP1	MRPL55	ENSCAPP00000013321	ENSCAPP00000003021	Aurora kinase A interacting protein 1.	Mitochondrial ribosomal protein L55.	0.950
AURKAIP1	MRPL58	ENSCAPP00000013321	ENSCAPP00000006944	Aurora kinase A interacting protein 1.	Mitochondrial ribosomal protein L58.	0.957
AURKAIP1	MRPS16	ENSCAPP00000013321	ENSCAPP00000014749	Aurora kinase A interacting protein 1.	Mitochondrial ribosomal protein S16.	0.994
AURKAIP1	MRPS25	ENSCAPP00000013321	ENSCAPP00000003275	Aurora kinase A interacting protein 1.	Mitochondrial ribosomal protein S25.	0.996
AURKAIP1	MRPS7	ENSCAPP00000013321	ENSCAPP00000008655	Aurora kinase A interacting protein 1.	Mitochondrial ribosomal protein S7.	0.997
ENSCAPP00000002819	AURKAIP1	ENSCAPP00000002819	ENSCAPP00000013321	annotation not available	Aurora kinase A interacting protein 1.	0.792
ENSCAPP00000002819	ENSCAPP00000012139	ENSCAPP00000002819	ENSCAPP00000012139	annotation not available	annotation not available	0.829
ENSCAPP00000002819	ENSCAPP00000012773	ENSCAPP00000002819	ENSCAPP00000012773	annotation not available	annotation not available	0.787
ENSCAPP00000002819	MRPL13	ENSCAPP00000002819	ENSCAPP00000004334	annotation not available	Mitochondrial ribosomal protein L13.	0.787
ENSCAPP00000002819	MRPL40	ENSCAPP00000002819	ENSCAPP00000011896	annotation not available	Mitochondrial ribosomal protein L40.	0.791
ENSCAPP00000002819	MRPL55	ENSCAPP00000002819	ENSCAPP00000003021	annotation not available	Mitochondrial ribosomal protein L55.	0.787
ENSCAPP00000002819	MRPL58	ENSCAPP00000002819	ENSCAPP00000006944	annotation not available	Mitochondrial ribosomal protein L58.	0.808
ENSCAPP00000002819	MRPS16	ENSCAPP00000002819	ENSCAPP00000014749	annotation not available	Mitochondrial ribosomal protein S16.	0.791
ENSCAPP00000002819	MRPS25	ENSCAPP00000002819	ENSCAPP00000003275	annotation not available	Mitochondrial ribosomal protein S25.	0.796
ENSCAPP00000002819	MRPS7	ENSCAPP00000002819	ENSCAPP00000008655	annotation not available	Mitochondrial ribosomal protein S7.	0.807