STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GALNTL5Polypeptide N-acetylgalactosaminyltransferase like 5. (376 aa)    
Predicted Functional Partners:
GCNT1
Glucosaminyl (N-acetyl) transferase 1.
     
 0.910
C1GALT1
Core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1.
     
 0.800
NELFA
Negative elongation factor complex member A.
     
 0.684
GCNT2
Glucosaminyl (N-acetyl) transferase 2 (I blood group).
     
 0.589
GCNT7
Glucosaminyl (N-acetyl) transferase family member 7.
     
 0.582
GCNT4
Glucosaminyl (N-acetyl) transferase 4.
     
 0.582
SPHKAP
SPHK1 interactor, AKAP domain containing.
      
 0.578
RGS12
Regulator of G protein signaling 12.
      
 0.564
WDR63
WD repeat domain 63.
     
 0.535
FBF1
Fas binding factor 1.
      
 0.524
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.