PTGES protein (Cavia aperea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

PTGES

Prostaglandin E synthase. (110 aa)

Predicted Functional Partners:

PTGES3

0.988

ENSCAPP00000007544

0.971

PTGS2

0.968

PTGS1

0.957

PTGIS

0.954

ENSCAPP00000016841

0.949

ENSCAPP00000017659

0.937

ENSCAPP00000010271

0.929

GSTO2

0.913

ENSCAPP00000006402

0.885

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCAPP00000006402	ENSCAPP00000016841	ENSCAPP00000006402	ENSCAPP00000016841	annotation not available	annotation not available	0.705
ENSCAPP00000006402	GSTO2	ENSCAPP00000006402	ENSCAPP00000007872	annotation not available	Glutathione S-transferase omega 2.	0.960
ENSCAPP00000006402	PTGES	ENSCAPP00000006402	ENSCAPP00000002829	annotation not available	Prostaglandin E synthase.	0.885
ENSCAPP00000007544	ENSCAPP00000010271	ENSCAPP00000007544	ENSCAPP00000010271	annotation not available	annotation not available	0.914
ENSCAPP00000007544	ENSCAPP00000016841	ENSCAPP00000007544	ENSCAPP00000016841	annotation not available	annotation not available	0.947
ENSCAPP00000007544	ENSCAPP00000017659	ENSCAPP00000007544	ENSCAPP00000017659	annotation not available	annotation not available	0.934
ENSCAPP00000007544	PTGES	ENSCAPP00000007544	ENSCAPP00000002829	annotation not available	Prostaglandin E synthase.	0.971
ENSCAPP00000007544	PTGES3	ENSCAPP00000007544	ENSCAPP00000008275	annotation not available	Prostaglandin E synthase 3.	0.971
ENSCAPP00000007544	PTGIS	ENSCAPP00000007544	ENSCAPP00000018636	annotation not available	Prostaglandin I2 synthase.	0.938
ENSCAPP00000007544	PTGS1	ENSCAPP00000007544	ENSCAPP00000016636	annotation not available	Prostaglandin-endoperoxide synthase 1.	0.955
ENSCAPP00000007544	PTGS2	ENSCAPP00000007544	ENSCAPP00000009722	annotation not available	Prostaglandin-endoperoxide synthase 2.	0.956
ENSCAPP00000010271	ENSCAPP00000007544	ENSCAPP00000010271	ENSCAPP00000007544	annotation not available	annotation not available	0.914
ENSCAPP00000010271	ENSCAPP00000016841	ENSCAPP00000010271	ENSCAPP00000016841	annotation not available	annotation not available	0.726
ENSCAPP00000010271	PTGES	ENSCAPP00000010271	ENSCAPP00000002829	annotation not available	Prostaglandin E synthase.	0.929
ENSCAPP00000010271	PTGES3	ENSCAPP00000010271	ENSCAPP00000008275	annotation not available	Prostaglandin E synthase 3.	0.935
ENSCAPP00000016841	ENSCAPP00000006402	ENSCAPP00000016841	ENSCAPP00000006402	annotation not available	annotation not available	0.705
ENSCAPP00000016841	ENSCAPP00000007544	ENSCAPP00000016841	ENSCAPP00000007544	annotation not available	annotation not available	0.947
ENSCAPP00000016841	ENSCAPP00000010271	ENSCAPP00000016841	ENSCAPP00000010271	annotation not available	annotation not available	0.726
ENSCAPP00000016841	ENSCAPP00000017659	ENSCAPP00000016841	ENSCAPP00000017659	annotation not available	annotation not available	0.934
ENSCAPP00000016841	GSTO2	ENSCAPP00000016841	ENSCAPP00000007872	annotation not available	Glutathione S-transferase omega 2.	0.705