STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNMTRNA guanine-7 methyltransferase. (371 aa)    
Predicted Functional Partners:
SUPT5H
SPT5 homolog, DSIF elongation factor subunit.
    
 0.993
RNGTT
RNA guanylyltransferase and 5'-phosphatase.
   
 0.992
ENSCAPP00000018237
annotation not available
   
 0.992
EIF4E2
Eukaryotic translation initiation factor 4E family member 2.
   
 
 0.947
EIF4E
Eukaryotic translation initiation factor 4E.
    
 0.941
NCBP1
Nuclear cap binding protein subunit 1.
   
 
 0.941
ENSCAPP00000017855
annotation not available
   
 
 0.939
SCAF8
SR-related CTD associated factor 8.
   
 0.896
SCAF4
SR-related CTD associated factor 4.
   
 0.896
EIF4E3
Eukaryotic translation initiation factor 4E family member 3.
    
 0.876
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.