STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRRC9Leucine rich repeat containing 9. (1149 aa)    
Predicted Functional Partners:
ADGRL2
Adhesion G protein-coupled receptor L2.
    
 0.826
ADGRL1
Adhesion G protein-coupled receptor L1.
    
 0.826
ADGRL3
Adhesion G protein-coupled receptor L3.
    
 0.826
NTNG1
Netrin G1.
    
 0.690
PPP1R11
Protein phosphatase 1 regulatory inhibitor subunit 11.
    
 0.686
ENSCAPP00000000802
annotation not available
   
 0.673
PPP1CA
Protein phosphatase 1 catalytic subunit alpha.
   
 0.673
PPP1CB
Protein phosphatase 1 catalytic subunit beta.
   
 0.673
GRIA3
Glutamate ionotropic receptor AMPA type subunit 3.
    
 0.582
GRIA1
Glutamate ionotropic receptor AMPA type subunit 1.
    
 0.582
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.