Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MCTP1Multiple C2 and transmembrane domain containing 1. (650 aa)    
Predicted Functional Partners:
PRSS45P
Serine protease 45, pseudogene.
      
 0.618
ITSN2
Intersectin 2.
     
 0.605
LMBR1
Limb development membrane protein 1.
      
 0.584
ENSCAPP00000009820
annotation not available
    
 
 0.583
ENSCAPP00000013499
annotation not available
      
 0.583
CALHM2
Calcium homeostasis modulator family member 2.
      
 0.580
SV2B
Synaptic vesicle glycoprotein 2B.
      
 0.572
MAP4K3
Mitogen-activated protein kinase kinase kinase kinase 3.
      
 0.569
ANO2
Anoctamin 2.
      
 0.568
LPCAT2
Lysophosphatidylcholine acyltransferase 2.
      
 0.560
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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