Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TNFAIP8L3TNF alpha induced protein 8 like 3. (204 aa)    
Predicted Functional Partners:
ENSCAPP00000012595
annotation not available
      
 0.748
SUSD6
Sushi domain containing 6.
      
 0.695
LMCD1
LIM and cysteine rich domains 1.
    
 
 0.621
TNFRSF21
TNF receptor superfamily member 21.
      
 0.616
ENSCAPP00000016969
annotation not available
      
 0.583
COG6
Component of oligomeric golgi complex 6.
      
 0.570
WHRN
Whirlin.
      
 0.529
ZC3H3
Zinc finger CCCH-type containing 3.
      
 0.467
SPPL2A
Signal peptide peptidase like 2A.
      
 0.454
SLC35F2
Solute carrier family 35 member F2.
      
 0.453
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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