STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RIOK3RIO kinase 3. (490 aa)    
Predicted Functional Partners:
NOB1
NIN1 (RPN12) binding protein 1 homolog.
   
 0.993
ENSCAPP00000004692
annotation not available
   
 0.989
RIOK2
RIO kinase 2.
   
 
 0.976
BYSL
Bystin like.
   
 0.972
NOP14
NOP14 nucleolar protein.
   
 
 0.955
RRP1
Ribosomal RNA processing 1.
   
 
 0.946
ENSCAPP00000016878
annotation not available
   
 0.944
FTSJ3
FtsJ RNA 2'-O-methyltransferase 3.
   
 0.943
NOP9
NOP9 nucleolar protein.
   
 
  0.941
NOC4L
Nucleolar complex associated 4 homolog.
   
 
 0.940
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.