STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FLRT2Fibronectin leucine rich transmembrane protein 2. (660 aa)    
Predicted Functional Partners:
USP30
Ubiquitin specific peptidase 30.
    
 
 0.854
ENSCAPP00000015197
annotation not available
     
  0.811
FGF1
Fibroblast growth factor 1.
     
  0.811
ENSCAPP00000017000
annotation not available
     
  0.811
ENSCAPP00000009905
annotation not available
      
 0.781
SSH1
Slingshot protein phosphatase 1.
    
 
 0.772
ENSCAPP00000012968
annotation not available
      
 0.757
FGF5
Fibroblast growth factor 5.
     
 0.737
ENSCAPP00000010886
annotation not available
     
  0.714
SRGAP1
SLIT-ROBO Rho GTPase activating protein 1.
     
 0.705
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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