STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTPALAlpha tocopherol transfer protein like. (342 aa)    
Predicted Functional Partners:
ENSCAPP00000004434
annotation not available
   
  0.517
HSD17B13
Hydroxysteroid 17-beta dehydrogenase 13.
   
  0.517
DHRS3
Dehydrogenase/reductase 3.
    
  0.508
SDR16C5
Short chain dehydrogenase/reductase family 16C member 5.
    
  0.508
ENSCAPP00000010012
annotation not available
    
  0.508
ENSCAPP00000010211
annotation not available
    
  0.508
ENSCAPP00000015436
annotation not available
    
  0.508
ANKFY1
Ankyrin repeat and FYVE domain containing 1.
    
  0.479
WWOX
WW domain containing oxidoreductase.
    
 0.470
CLTC
Clathrin heavy chain.
     
 0.470
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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