STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000002862annotation not available (912 aa)    
Predicted Functional Partners:
WDR90
WD repeat domain 90.
    
   0.748
GNG13
G protein subunit gamma 13.
    
 0.623
TRIO
Trio Rho guanine nucleotide exchange factor.
    
  0.575
KALRN
Kalirin RhoGEF kinase.
    
  0.575
TRPC6
Transient receptor potential cation channel subfamily C member 6.
    
 
 0.566
TRPM5
Transient receptor potential cation channel subfamily M member 5.
      
 0.557
PTK7
Protein tyrosine kinase 7 (inactive).
    
  0.547
ENSCAPP00000001392
annotation not available
    
  0.545
RIPK4
Receptor interacting serine/threonine kinase 4.
    
  0.545
GABBR2
Gamma-aminobutyric acid type B receptor subunit 2.
    
 0.539
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.