STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000002863annotation not available (138 aa)    
Predicted Functional Partners:
BAG3
BCL2 associated athanogene 3.
    
  0.999
WDR83OS
WD repeat domain 83 opposite strand.
    
 0.985
MED1
Mediator complex subunit 1.
    
  0.957
ENSCAPP00000013337
annotation not available
    
 
 0.947
NCLN
Nicalin.
    
 
 0.946
ENSCAPP00000017536
annotation not available
    
  0.938
ENSCAPP00000009408
annotation not available
    
 0.932
SPAG1
Sperm associated antigen 1.
    
  0.931
CCT2
Chaperonin containing TCP1 subunit 2.
     
 0.931
PIH1D2
PIH1 domain containing 2.
    
  0.926
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.