STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000002863annotation not available (138 aa)    
Predicted Functional Partners:
TMEM147
Transmembrane protein 147.
   
 0.996
ENSCAPP00000013337
annotation not available
    
 0.996
NCLN
Nicalin.
    
 0.995
WDR83OS
WD repeat domain 83 opposite strand.
    
 0.994
GET4
Guided entry of tail-anchored proteins factor 4.
   
 
 0.952
CCT2
Chaperonin containing TCP1 subunit 2.
   
 
 0.945
ENSCAPP00000014240
annotation not available
    
 0.940
SGTA
Small glutamine rich tetratricopeptide repeat containing alpha.
    
 0.939
ENSCAPP00000009408
annotation not available
   
 0.935
SGTB
Small glutamine rich tetratricopeptide repeat containing beta.
    
 0.933
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.