STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000002879annotation not available (289 aa)    
Predicted Functional Partners:
ACTG2
Actin gamma 2, smooth muscle.
    
 
 0.843
SUCLG2
succinate-CoA ligase GDP-forming beta subunit.
   
 0.789
ENSCAPP00000007084
annotation not available
     
 0.730
RBKS
Ribokinase.
    
 0.723
ENSCAPP00000011099
annotation not available
   
 
 0.723
SUCLA2
succinate-CoA ligase ADP-forming beta subunit.
   
 0.701
ACLY
ATP citrate lyase.
   
 0.699
MINDY1
MINDY lysine 48 deubiquitinase 1.
    
 0.693
MMAA
Metabolism of cobalamin associated A.
    
 0.693
RAB40B
RAB40B, member RAS oncogene family.
   
    0.667
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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