STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RORARAR related orphan receptor A. (445 aa)    
Predicted Functional Partners:
ARNTL
Aryl hydrocarbon receptor nuclear translocator like.
    
 0.988
CRY1
Cryptochrome circadian regulator 1.
    
 0.981
CRY2
Cryptochrome circadian regulator 2.
    
 0.971
ENSCAPP00000001758
annotation not available
    
 0.946
EP300
E1A binding protein p300.
    
 0.933
RORB
RAR related orphan receptor B.
    
  0.926
ENSCAPP00000014420
annotation not available
     
 0.922
ITPR1
Inositol 1,4,5-trisphosphate receptor type 1.
    
 0.919
SLC1A6
Solute carrier family 1 member 6.
    
  0.918
RORC
RAR related orphan receptor C.
     
 0.912
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.