STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TLDC2TBC/LysM-associated domain containing 2. (172 aa)    
Predicted Functional Partners:
ATP6V1B2
ATPase H+ transporting V1 subunit B2.
    
 0.626
ATP6V1C1
ATPase H+ transporting V1 subunit C1.
    
  0.589
ATP6V1D
ATPase H+ transporting V1 subunit D.
    
 0.567
CDC16
Cell division cycle 16.
      
 0.565
ENSCAPP00000000372
annotation not available
      
 0.560
ATP6V1G1
ATPase H+ transporting V1 subunit G1.
    
  0.557
ENSCAPP00000008947
annotation not available
    
 0.535
ATP6V1A
ATPase H+ transporting V1 subunit A.
    
 0.509
ATP6V1C2
ATPase H+ transporting V1 subunit C2.
    
  0.506
ATP6V1G2
ATPase H+ transporting V1 subunit G2.
    
  0.491
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.