STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMARCA1SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1. (711 aa)    
Predicted Functional Partners:
BAZ1A
Bromodomain adjacent to zinc finger domain 1A.
    
 0.989
POLE3
DNA polymerase epsilon 3, accessory subunit.
    
 0.984
BPTF
Bromodomain PHD finger transcription factor.
   
 0.983
CECR2
CECR2 histone acetyl-lysine reader.
    
 0.977
CHRAC1
Chromatin accessibility complex subunit 1.
    
 0.968
ENSCAPP00000001550
annotation not available
    
 0.954
BAZ1B
Bromodomain adjacent to zinc finger domain 1B.
   
 0.954
RSF1
Remodeling and spacing factor 1.
   
 0.943
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.915
EZH2
Enhancer of zeste 2 polycomb repressive complex 2 subunit.
  
 0.912
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.