Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SMARCA1SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1. (711 aa)    
Predicted Functional Partners:
CECR2
CECR2 histone acetyl-lysine reader.
    
 0.990
BPTF
Bromodomain PHD finger transcription factor.
   
 0.990
POLE3
DNA polymerase epsilon 3, accessory subunit.
    
 0.988
BAZ1B
Bromodomain adjacent to zinc finger domain 1B.
   
 0.987
RSF1
Remodeling and spacing factor 1.
   
 0.983
BAZ1A
Bromodomain adjacent to zinc finger domain 1A.
   
 0.982
CHRAC1
Chromatin accessibility complex subunit 1.
    
 0.982
ENSCAPP00000008218
annotation not available
    
  0.976
ENSCAPP00000007768
annotation not available
    
 0.961
HMGXB4
HMG-box containing 4.
    
 0.957
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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