Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BVESBlood vessel epicardial substance. (359 aa)    
Predicted Functional Partners:
KCNK2
Potassium two pore domain channel subfamily K member 2.
     
 0.935
POPDC3
Popeye domain containing 3.
   
 
 0.920
POPDC2
Popeye domain containing 2.
   
 
 0.916
TJP1
Tight junction protein 1.
     
 0.916
RNF123
Ring finger protein 123.
    
   0.911
KCNK10
Potassium two pore domain channel subfamily K member 10.
     
 0.867
UBAC1
UBA domain containing 1.
    
   0.840
TBCCD1
TBCC domain containing 1.
      
 0.797
GINS1
GINS complex subunit 1.
      
 0.755
CRTAM
Cytotoxic and regulatory T cell molecule.
      
 0.703
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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