STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVESBlood vessel epicardial substance. (359 aa)    
Predicted Functional Partners:
TJP1
Tight junction protein 1.
     
 0.831
TMEM45B
Transmembrane protein 45B.
      
 0.568
TBCCD1
TBCC domain containing 1.
      
 0.559
GPR153
G protein-coupled receptor 153.
      
 0.557
GFOD2
Glucose-fructose oxidoreductase domain containing 2.
      
 0.553
CRTAM
Cytotoxic and regulatory T cell molecule.
      
 0.549
GINS1
GINS complex subunit 1.
      
 0.549
ENSCAPP00000002045
annotation not available
     
 0.548
BCKDHB
Branched chain keto acid dehydrogenase E1 subunit beta.
      
 0.548
ENSCAPP00000007325
annotation not available
      
 0.546
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.